CellScope.fm._diff_pct

CellScope.fm. _diff_pct (fea_1 : np.ndarray, fea_2 : np.ndarray, selected_number : int)

The _diff_pct function calculates the differential percentage of gene expression between two clusters, selecting the top genes with the highest percentage differences according to the specified number of genes.

Parameters

• fea_1 (np.ndarray):

  Feature matrix for the first cluster.

• fea_2 (np.ndarray):

  Feature matrix for the second cluster.

• selected_number (int):

  Number of top markers to select.

Return

• marker_indices (ndarray):

  Indices of the top markers based on differential percentage.

• marker_values (ndarray):

  Differential percentage values of the selected markers.