CellScope.fm._t_test_parallel

CellScope.fm. _t_test_parallel (fea_1 : np.ndarray, fea_2 : np.ndarray, selected_number : int)

The _t_test_parallel function performs a t-test [KT15] in parallel to compare gene expression between two clusters and selects the top genes based on the specified number of genes with the most significant p-values.

Parameters

• fea_1 (np.ndarray):

  Feature matrix for the first cluster.

• fea_2 (np.ndarray):

  Feature matrix for the second cluster.

• selected_number (int):

  Number of top markers to select.

Return

• marker_indices (ndarray):

  Indices of the top markers based on t-test.

• p_values (ndarray):

  P-values of the selected markers.